Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Prox1P48437 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Prox1P48437 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.78□□□□□ -0.68
Prox1P48437 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Gm26461-201ENSMUST00000175064 290 ntBASIC10.78□□□□□ -0.68
Prox1P48437 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.78□□□□□ -0.68
Prox1P48437 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Gm8885-201ENSMUST00000189382 598 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Gm6450-201ENSMUST00000200896 574 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.78□□□□□ -0.68
Prox1P48437 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Prox1P48437 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Prox1P48437 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Prox1P48437 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Prox1P48437 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Prox1P48437 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Prox1P48437 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Prox1P48437 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Prox1P48437 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.77□□□□□ -0.68
Prox1P48437 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Prox1P48437 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Prox1P48437 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Prox1P48437 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Prox1P48437 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Prox1P48437 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.77□□□□□ -0.68
Prox1P48437 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
Prox1P48437 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Prox1P48437 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Gm11500-201ENSMUST00000118237 601 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Prox1P48437 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Gm17376-201ENSMUST00000166016 84 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Prox1P48437 Gm37597-201ENSMUST00000191853 382 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Prox1P48437 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.77□□□□□ -0.69
Prox1P48437 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Prox1P48437 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.77□□□□□ -0.69
Prox1P48437 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Prox1P48437 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Prox1P48437 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms