Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sox18P43680 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.09□□□□□ -0.63
Sox18P43680 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Gm12696-201ENSMUST00000122361 905 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Sox18P43680 Gm3329-201ENSMUST00000159873 556 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Gm20574-201ENSMUST00000182867 917 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox18P43680 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC11.09□□□□□ -0.63
Sox18P43680 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC11.09□□□□□ -0.63
Sox18P43680 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.09□□□□□ -0.63
Sox18P43680 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 AC138716.2-201ENSMUST00000226670 1016 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.09□□□□□ -0.63
Sox18P43680 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox18P43680 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.09□□□□□ -0.63
Sox18P43680 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Sox18P43680 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox18P43680 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Sox18P43680 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Sox18P43680 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm14234-201ENSMUST00000119539 845 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm13204-201ENSMUST00000120110 821 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm8459-201ENSMUST00000162504 760 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm17075-201ENSMUST00000171924 670 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm24954-201ENSMUST00000178831 110 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm37560-201ENSMUST00000194289 1000 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm38154-201ENSMUST00000195444 340 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm43867-201ENSMUST00000203860 525 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm44823-201ENSMUST00000204775 1107 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 AC132237.2-201ENSMUST00000221702 1209 ntBASIC11.08□□□□□ -0.64
Sox18P43680 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.08□□□□□ -0.64
Sox18P43680 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Sox18P43680 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Sox18P43680 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Sox18P43680 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Sox18P43680 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms