Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Hoxc5P32043 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm12997-201ENSMUST00000120207 640 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Olfml3-204ENSMUST00000169286 874 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm17825-201ENSMUST00000206836 794 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm6108-201ENSMUST00000208365 367 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Mir433-201ENSMUST00000093564 124 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.39□□□□□ -0.75
Hoxc5P32043 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Hoxc5P32043 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Hoxc5P32043 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm15617-201ENSMUST00000118973 771 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm15549-201ENSMUST00000121595 622 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm29499-201ENSMUST00000189151 486 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm28329-201ENSMUST00000191208 689 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm29171-201ENSMUST00000191397 486 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.38□□□□□ -0.75
Hoxc5P32043 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Hoxc5P32043 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms