Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Cd28P31041 Gm11222-201ENSMUST00000119005 738 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Gm15207-201ENSMUST00000119259 442 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Gm11783-201ENSMUST00000119549 885 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.83□□□□□ -0.84
Cd28P31041 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.83□□□□□ -0.84
Cd28P31041 Gm17827-201ENSMUST00000211825 742 ntBASIC9.83□□□□□ -0.84
Cd28P31041 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 Gm4978-201ENSMUST00000071565 801 ntBASIC9.83□□□□□ -0.84
Cd28P31041 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.83□□□□□ -0.84
Cd28P31041 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Cd28P31041 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cd28P31041 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cd28P31041 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cd28P31041 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.82□□□□□ -0.84
Cd28P31041 Mir1896-201ENSMUST00000122641 81 ntBASIC9.82□□□□□ -0.84
Cd28P31041 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.82□□□□□ -0.84
Cd28P31041 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.82□□□□□ -0.84
Cd28P31041 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Gm43184-201ENSMUST00000197247 542 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.82□□□□□ -0.84
Cd28P31041 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Cd28P31041 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.82□□□□□ -0.84
Cd28P31041 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.82□□□□□ -0.84
Cd28P31041 Gm19309-201ENSMUST00000218295 205 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.82□□□□□ -0.84
Cd28P31041 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cd28P31041 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cd28P31041 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.82□□□□□ -0.84
Cd28P31041 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC9.82□□□□□ -0.84
Cd28P31041 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cd28P31041 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cd28P31041 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Cd28P31041 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.81□□□□□ -0.84
Cd28P31041 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cd28P31041 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.81□□□□□ -0.84
Cd28P31041 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.81□□□□□ -0.84
Cd28P31041 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.81□□□□□ -0.84
Cd28P31041 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Cd28P31041 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.81□□□□□ -0.84
Cd28P31041 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms