Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
P20040 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.98□□□□□ -0.81
P20040 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.98□□□□□ -0.81
P20040 Gm27530-201ENSMUST00000184096 98 ntBASIC9.98□□□□□ -0.81
P20040 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
P20040 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.98□□□□□ -0.81
P20040 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.98□□□□□ -0.81
P20040 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.98□□□□□ -0.81
P20040 Gm37986-201ENSMUST00000193285 383 ntBASIC9.98□□□□□ -0.81
P20040 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.98□□□□□ -0.81
P20040 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.98□□□□□ -0.81
P20040 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.98□□□□□ -0.81
P20040 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.98□□□□□ -0.81
P20040 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
P20040 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.98□□□□□ -0.81
P20040 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
P20040 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.98□□□□□ -0.81
P20040 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
P20040 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.97□□□□□ -0.81
P20040 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
P20040 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
P20040 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.97□□□□□ -0.81
P20040 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
P20040 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.97□□□□□ -0.81
P20040 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
P20040 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.97□□□□□ -0.81
P20040 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
P20040 Gm12165-201ENSMUST00000117047 342 ntBASIC9.97□□□□□ -0.81
P20040 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.97□□□□□ -0.81
P20040 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.97□□□□□ -0.81
P20040 Gm23699-201ENSMUST00000158835 135 ntBASIC9.97□□□□□ -0.81
P20040 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.97□□□□□ -0.81
P20040 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.97□□□□□ -0.81
P20040 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.97□□□□□ -0.81
P20040 Gm20426-201ENSMUST00000173657 440 ntBASIC9.97□□□□□ -0.81
P20040 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.97□□□□□ -0.81
P20040 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.97□□□□□ -0.81
P20040 Gm19353-201ENSMUST00000184561 445 ntBASIC9.97□□□□□ -0.81
P20040 Gm37246-201ENSMUST00000192665 835 ntBASIC9.97□□□□□ -0.81
P20040 Gm5714-201ENSMUST00000197343 566 ntBASIC9.97□□□□□ -0.81
P20040 Gm42997-202ENSMUST00000200321 985 ntBASIC9.97□□□□□ -0.81
P20040 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.97□□□□□ -0.81
P20040 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.97□□□□□ -0.81
P20040 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.97□□□□□ -0.81
P20040 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
P20040 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
P20040 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
P20040 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms