Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Fv4P11370 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Fv4P11370 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.83□□□□□ -0.68
Fv4P11370 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Fv4P11370 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC10.82□□□□□ -0.68
Fv4P11370 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.82□□□□□ -0.68
Fv4P11370 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.82□□□□□ -0.68
Fv4P11370 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm18367-201ENSMUST00000176139 600 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Gm23694-201ENSMUST00000179335 110 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm27341-201ENSMUST00000183570 106 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Gm43186-201ENSMUST00000198130 824 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.82□□□□□ -0.68
Fv4P11370 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Fv4P11370 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Fv4P11370 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.82□□□□□ -0.68
Fv4P11370 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Fv4P11370 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Fv4P11370 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm23251-201ENSMUST00000103773 110 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm24990-201ENSMUST00000157406 323 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm37246-201ENSMUST00000192665 835 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm37284-201ENSMUST00000193607 539 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm37301-201ENSMUST00000195412 568 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Fv4P11370 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.81□□□□□ -0.68
Fv4P11370 Gm43852-201ENSMUST00000202098 917 ntBASIC10.81□□□□□ -0.68
Fv4P11370 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms