Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm29615-201ENSMUST00000185371 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28224-201ENSMUST00000186078 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm29001-201ENSMUST00000186177 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28292-201ENSMUST00000186593 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28101-201ENSMUST00000187608 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm29076-201ENSMUST00000187689 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28302-201ENSMUST00000187931 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28646-201ENSMUST00000188220 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28205-201ENSMUST00000189177 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm29032-201ENSMUST00000189797 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm28695-201ENSMUST00000190300 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm37448-201ENSMUST00000192795 697 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Gm18038-201ENSMUST00000197900 485 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
UbbP0CG49 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Gm10478-201ENSMUST00000084451 396 ntBASIC9.77□□□□□ -0.85
UbbP0CG49 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
UbbP0CG49 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
UbbP0CG49 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
UbbP0CG49 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UbbP0CG49 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
UbbP0CG49 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm11509-201ENSMUST00000117358 325 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm8815-201ENSMUST00000173809 620 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm5745-201ENSMUST00000183748 313 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm42867-201ENSMUST00000202995 469 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm17812-201ENSMUST00000204935 318 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm45113-201ENSMUST00000207518 165 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC9.76□□□□□ -0.85
UbbP0CG49 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 AC153962.4-201ENSMUST00000217878 242 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm270-201ENSMUST00000223010 976 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gm8399-201ENSMUST00000082300 1117 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
UbbP0CG49 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.76□□□□□ -0.85
UbbP0CG49 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
UbbP0CG49 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
UbbP0CG49 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
UbbP0CG49 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UbbP0CG49 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.75□□□□□ -0.85
UbbP0CG49 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.75□□□□□ -0.85
UbbP0CG49 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
UbbP0CG49 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
UbbP0CG49 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
UbbP0CG49 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms