Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chmp6P0C0A3 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm14585-201ENSMUST00000120713 634 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm15549-201ENSMUST00000121595 622 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm44315-201ENSMUST00000203041 219 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm44008-201ENSMUST00000204345 412 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Gm45770-201ENSMUST00000212105 616 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Olfr584-201ENSMUST00000098210 964 ntBASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chmp6P0C0A3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm17391-201ENSMUST00000171036 126 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm45398-201ENSMUST00000210561 165 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Chmp6P0C0A3 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Chmp6P0C0A3 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Chmp6P0C0A3 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms