Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm6423-201ENSMUST00000204315 934 ntBASIC16.66■□□□□ 0.26
NclP09405 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NclP09405 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NclP09405 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NclP09405 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NclP09405 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC16.66■□□□□ 0.26
NclP09405 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC16.66■□□□□ 0.26
NclP09405 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NclP09405 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
NclP09405 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NclP09405 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NclP09405 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NclP09405 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC16.65■□□□□ 0.26
NclP09405 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC16.65■□□□□ 0.26
NclP09405 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NclP09405 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Gm4917-201ENSMUST00000121452 650 ntBASIC16.65■□□□□ 0.26
NclP09405 Gm13445-201ENSMUST00000121664 307 ntBASIC16.65■□□□□ 0.26
NclP09405 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC16.65■□□□□ 0.26
NclP09405 Gm4982-201ENSMUST00000160440 1098 ntBASIC16.65■□□□□ 0.26
NclP09405 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC16.65■□□□□ 0.26
NclP09405 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC16.65■□□□□ 0.26
NclP09405 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NclP09405 Gm25201-201ENSMUST00000083093 170 ntBASIC16.65■□□□□ 0.26
NclP09405 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Gm9544-201ENSMUST00000223349 2482 ntBASIC16.65■□□□□ 0.26
NclP09405 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC16.65■□□□□ 0.26
NclP09405 Gm15784-201ENSMUST00000120260 1462 ntBASIC16.65■□□□□ 0.26
NclP09405 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC16.65■□□□□ 0.26
NclP09405 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 AC154537.1-201ENSMUST00000226101 1304 ntBASIC16.65■□□□□ 0.26
NclP09405 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.65■□□□□ 0.26
NclP09405 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NclP09405 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NclP09405 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NclP09405 Gm44755-201ENSMUST00000207830 2102 ntBASIC16.64■□□□□ 0.25
NclP09405 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NclP09405 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC16.64■□□□□ 0.25
NclP09405 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Gm14398-201ENSMUST00000117287 1073 ntBASIC16.64■□□□□ 0.25
NclP09405 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC16.64■□□□□ 0.25
NclP09405 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC16.64■□□□□ 0.25
NclP09405 AC158392.3-201ENSMUST00000224271 1284 ntBASIC16.64■□□□□ 0.25
NclP09405 Gm4604-201ENSMUST00000025040 390 ntBASIC16.64■□□□□ 0.25
NclP09405 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC16.64■□□□□ 0.25
NclP09405 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC16.64■□□□□ 0.25
NclP09405 Gm37105-201ENSMUST00000192251 2085 ntBASIC16.64■□□□□ 0.25
NclP09405 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NclP09405 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NclP09405 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NclP09405 Btrc-209ENSMUST00000224478 2194 ntBASIC16.64■□□□□ 0.25
NclP09405 AC127597.1-201ENSMUST00000225697 5711 ntBASIC16.63■□□□□ 0.25
NclP09405 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC16.63■□□□□ 0.25
NclP09405 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
NclP09405 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NclP09405 Mup-ps29-201ENSMUST00000122281 202 ntBASIC16.63■□□□□ 0.25
NclP09405 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC16.63■□□□□ 0.25
NclP09405 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Gm4753-201ENSMUST00000188327 1255 ntBASIC16.63■□□□□ 0.25
NclP09405 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC16.63■□□□□ 0.25
NclP09405 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC16.63■□□□□ 0.25
NclP09405 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC16.63■□□□□ 0.25
NclP09405 Gm9102-201ENSMUST00000219250 465 ntBASIC16.63■□□□□ 0.25
NclP09405 Gm7525-201ENSMUST00000219425 454 ntBASIC16.63■□□□□ 0.25
NclP09405 Gm7959-201ENSMUST00000221823 1078 ntBASIC16.63■□□□□ 0.25
NclP09405 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NclP09405 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms