Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.49□□□□□ -0.57
Hoxb3P09026 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm24294-201ENSMUST00000158295 277 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm28926-201ENSMUST00000191063 680 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm19214-201ENSMUST00000191956 1083 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm5982-201ENSMUST00000196234 512 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Ighv1-70-201ENSMUST00000196509 351 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm6423-201ENSMUST00000204315 934 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 AC117949.2-201ENSMUST00000225900 584 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Mir341-201ENSMUST00000093593 96 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Olfr584-201ENSMUST00000098210 964 ntBASIC11.49□□□□□ -0.57
Hoxb3P09026 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Hoxb3P09026 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Hoxb3P09026 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm45177-201ENSMUST00000209104 2307 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm14481-201ENSMUST00000117178 629 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm15529-201ENSMUST00000121833 994 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm26134-201ENSMUST00000178484 110 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm8920-201ENSMUST00000196153 924 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm8574-201ENSMUST00000203207 924 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Hoxb3P09026 AC161250.1-201ENSMUST00000213426 1111 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 AC153532.1-201ENSMUST00000218126 1111 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 AC132237.2-201ENSMUST00000221702 1209 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.48□□□□□ -0.57
Hoxb3P09026 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Hoxb3P09026 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.48□□□□□ -0.57
Hoxb3P09026 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms