Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
IghmP01872 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Gm15352-201ENSMUST00000118696 270 ntBASIC10.48□□□□□ -0.73
IghmP01872 Gm15615-201ENSMUST00000118876 198 ntBASIC10.48□□□□□ -0.73
IghmP01872 Gm8302-201ENSMUST00000119217 852 ntBASIC10.48□□□□□ -0.73
IghmP01872 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.48□□□□□ -0.73
IghmP01872 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
IghmP01872 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
IghmP01872 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC10.48□□□□□ -0.73
IghmP01872 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.48□□□□□ -0.73
IghmP01872 Gm19208-201ENSMUST00000213861 912 ntBASIC10.48□□□□□ -0.73
IghmP01872 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.48□□□□□ -0.73
IghmP01872 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Ginm1-202ENSMUST00000065124 300 ntBASIC10.48□□□□□ -0.73
IghmP01872 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
IghmP01872 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
IghmP01872 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.48□□□□□ -0.73
IghmP01872 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.48□□□□□ -0.73
IghmP01872 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
IghmP01872 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.47□□□□□ -0.73
IghmP01872 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.47□□□□□ -0.73
IghmP01872 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Gm12217-201ENSMUST00000118858 696 ntBASIC10.47□□□□□ -0.73
IghmP01872 Gm14395-201ENSMUST00000120494 563 ntBASIC10.47□□□□□ -0.73
IghmP01872 Gm11836-201ENSMUST00000121022 441 ntBASIC10.47□□□□□ -0.73
IghmP01872 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Gm25732-201ENSMUST00000175168 60 ntBASIC10.47□□□□□ -0.73
IghmP01872 Gm28032-201ENSMUST00000184104 96 ntBASIC10.47□□□□□ -0.73
IghmP01872 Mir7051-201ENSMUST00000184167 73 ntBASIC10.47□□□□□ -0.73
IghmP01872 Gm27441-201ENSMUST00000185000 105 ntBASIC10.47□□□□□ -0.73
IghmP01872 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.47□□□□□ -0.73
IghmP01872 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Gm38321-201ENSMUST00000195053 235 ntBASIC10.47□□□□□ -0.73
IghmP01872 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.47□□□□□ -0.73
IghmP01872 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.47□□□□□ -0.73
IghmP01872 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.47□□□□□ -0.73
IghmP01872 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.47□□□□□ -0.73
IghmP01872 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
IghmP01872 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.46□□□□□ -0.73
IghmP01872 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms