Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.88□□□□□ -0.51
Itgb3O54890 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.88□□□□□ -0.51
Itgb3O54890 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm25343-201ENSMUST00000157460 107 ntBASIC11.88□□□□□ -0.51
Itgb3O54890 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.88□□□□□ -0.51
Itgb3O54890 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Itgb3O54890 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.88□□□□□ -0.51
Itgb3O54890 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Itgb3O54890 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Itgb3O54890 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Itgb3O54890 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Itgb3O54890 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Itgb3O54890 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Itgb3O54890 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Gm12791-201ENSMUST00000120788 655 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Gm4917-201ENSMUST00000121452 650 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm22379-201ENSMUST00000157480 131 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Id2-203ENSMUST00000222667 958 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.87□□□□□ -0.51
Itgb3O54890 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Itgb3O54890 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Itgb3O54890 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Itgb3O54890 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Itgb3O54890 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Itgb3O54890 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.86□□□□□ -0.51
Itgb3O54890 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Itgb3O54890 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms