Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.13□□□□□ -0.31
Tcof1O08784 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC13.13□□□□□ -0.31
Tcof1O08784 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.13□□□□□ -0.31
Tcof1O08784 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.13□□□□□ -0.31
Tcof1O08784 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.13□□□□□ -0.31
Tcof1O08784 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.13□□□□□ -0.31
Tcof1O08784 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.13□□□□□ -0.31
Tcof1O08784 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Tcof1O08784 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm43522-201ENSMUST00000196697 1922 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm25063-201ENSMUST00000104666 94 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm12791-201ENSMUST00000120788 655 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Gm10169-201ENSMUST00000121822 348 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.12□□□□□ -0.31
Tcof1O08784 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm9369-201ENSMUST00000196009 733 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.12□□□□□ -0.31
Tcof1O08784 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.12□□□□□ -0.31
Tcof1O08784 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Tcof1O08784 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.11□□□□□ -0.31
Tcof1O08784 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tcof1O08784 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Tcof1O08784 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Gm19178-201ENSMUST00000217524 1819 ntBASIC13.11□□□□□ -0.31
Tcof1O08784 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.11□□□□□ -0.31
Tcof1O08784 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.11□□□□□ -0.31
Tcof1O08784 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tcof1O08784 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms