Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm22042-201ENSMUST00000082989 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm26110-201ENSMUST00000083971 165 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Pcdh1F7BJK1 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 AA474408-201ENSMUST00000098110 3339 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm12715-201ENSMUST00000121430 1128 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm3332-201ENSMUST00000189337 928 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm37666-201ENSMUST00000194110 866 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm5302-201ENSMUST00000202130 796 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm45856-201ENSMUST00000212752 416 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm6082-201ENSMUST00000215204 454 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 AC164437.3-201ENSMUST00000228323 347 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Pcdh1F7BJK1 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Pcdh1F7BJK1 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms