Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Gm45808-201ENSMUST00000210701 789 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc188F6WEU2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm16439-201ENSMUST00000100687 564 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm14231-201ENSMUST00000120090 592 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm17107-201ENSMUST00000170983 553 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 H2-Pb-201ENSMUST00000172731 531 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm26931-201ENSMUST00000182273 609 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm18443-201ENSMUST00000185358 556 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Zkscan7-205ENSMUST00000216462 990 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.3□□□□□ -0.6
Ccdc188F6WEU2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc188F6WEU2 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms