Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm23745-201ENSMUST00000104230 125 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm16459-201ENSMUST00000121443 686 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Mir432-201ENSMUST00000157230 75 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm18733-202ENSMUST00000174447 401 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm24954-201ENSMUST00000178831 110 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm9625-201ENSMUST00000180422 955 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm43854-201ENSMUST00000200418 394 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Mir326-201ENSMUST00000083637 95 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Gm43167-201ENSMUST00000202001 1606 ntBASIC12.99□□□□□ -0.33
Clrn2B2RVW2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Clrn2B2RVW2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm22344-201ENSMUST00000122642 278 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm16547-201ENSMUST00000159474 293 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm42867-201ENSMUST00000202995 469 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm7589-201ENSMUST00000085631 534 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.98□□□□□ -0.33
Clrn2B2RVW2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 n-R5s130-201ENSMUST00000178128 119 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Gm24312-201ENSMUST00000178677 119 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 n-R5s106-201ENSMUST00000179060 119 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 n-R5s118-201ENSMUST00000179887 119 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Clrn2B2RVW2 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC12.97□□□□□ -0.33
Clrn2B2RVW2 Gm43002-201ENSMUST00000200310 155 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms