Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm22341-201ENSMUST00000083775 129 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm6425-201ENSMUST00000136332 790 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm25591-201ENSMUST00000177317 94 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm26957-201ENSMUST00000182645 977 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm42803-201ENSMUST00000201051 451 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 AC165260.2-201ENSMUST00000225371 395 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm13120-201ENSMUST00000117343 1446 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col4a6B1AVK5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm5697-201ENSMUST00000122295 2482 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm14633-201ENSMUST00000121152 470 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm2474-201ENSMUST00000195162 559 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm44917-201ENSMUST00000208798 520 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm18164-201ENSMUST00000213769 927 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm18166-201ENSMUST00000215557 927 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 AC155300.1-201ENSMUST00000219134 480 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 AC139155.1-201ENSMUST00000226043 444 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm8730-201ENSMUST00000076373 954 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm8618-201ENSMUST00000097570 432 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Gm10537-201ENSMUST00000192625 1698 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.32□□□□□ -0.6
Col4a6B1AVK5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.32□□□□□ -0.6
Col4a6B1AVK5 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col4a6B1AVK5 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms