Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm12906-201ENSMUST00000154610 441 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm6439-201ENSMUST00000199849 862 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm12950-201ENSMUST00000121683 417 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm13981-201ENSMUST00000122360 447 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm8451-201ENSMUST00000170338 447 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Gm5453-201ENSMUST00000080866 447 ntBASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scn3aA2ASI5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Gm5302-201ENSMUST00000202130 796 ntBASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Gm9791-201ENSMUST00000060997 447 ntBASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Scn3aA2ASI5 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn3aA2ASI5 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Scn3aA2ASI5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
Scn3aA2ASI5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn3aA2ASI5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms