Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm10051-201ENSMUST00000145209 414 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Mir6546-201ENSMUST00000184460 62 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm37981-201ENSMUST00000194280 535 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm37905-201ENSMUST00000195310 341 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm43058-201ENSMUST00000197645 625 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm5363-201ENSMUST00000211927 938 ntBASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Cpne8Q9DC53 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm14592-201ENSMUST00000117201 560 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm15352-201ENSMUST00000118696 270 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm4654-201ENSMUST00000183305 982 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm42867-201ENSMUST00000202995 469 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cpne8Q9DC53 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm4726-201ENSMUST00000135604 736 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm6019-201ENSMUST00000148369 736 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cpne8Q9DC53 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms