Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm12419-201ENSMUST00000116649 636 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm12218-201ENSMUST00000117666 399 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm21778-201ENSMUST00000178779 471 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm29067-201ENSMUST00000190821 470 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 BC043934-202ENSMUST00000185694 2356 ntBASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp4bQ9D8B3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Snord17-201ENSMUST00000104526 238 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Gm45496-201ENSMUST00000209918 2917 ntBASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp4bQ9D8B3 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm15528-201ENSMUST00000117821 864 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm11956-201ENSMUST00000119525 512 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm11573-201ENSMUST00000119956 394 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm14395-201ENSMUST00000120494 563 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Uba52-ps-201ENSMUST00000183770 379 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Gm45398-201ENSMUST00000210561 165 ntBASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Chmp4bQ9D8B3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms