Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
U2af1Q9D883 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
U2af1Q9D883 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
U2af1Q9D883 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm3619-201ENSMUST00000219947 775 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 Id2-203ENSMUST00000222667 958 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm25580-201ENSMUST00000083409 327 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
U2af1Q9D883 Gm37660-201ENSMUST00000192754 1732 ntBASIC14.74□□□□□ -0.05
U2af1Q9D883 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
U2af1Q9D883 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm29358-202ENSMUST00000187941 3227 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm12795-201ENSMUST00000117594 539 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm13668-201ENSMUST00000119237 1001 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm12791-201ENSMUST00000120788 655 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm4917-201ENSMUST00000121452 650 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC14.73□□□□□ -0.05
U2af1Q9D883 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.73□□□□□ -0.05
U2af1Q9D883 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Gm9873-201ENSMUST00000063891 1097 ntBASIC14.73□□□□□ -0.05
U2af1Q9D883 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
U2af1Q9D883 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC14.73□□□□□ -0.05
U2af1Q9D883 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.72□□□□□ -0.05
U2af1Q9D883 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm8194-201ENSMUST00000159783 859 ntBASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm4982-201ENSMUST00000160440 1098 ntBASIC14.72□□□□□ -0.05
U2af1Q9D883 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Snord55-201ENSMUST00000174939 79 ntBASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm42655-201ENSMUST00000202782 1134 ntBASIC14.72□□□□□ -0.05
U2af1Q9D883 Gm3793-201ENSMUST00000204973 672 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms