Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Chmp4cQ9D7F7 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm14724-201ENSMUST00000118400 537 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm15566-201ENSMUST00000121130 590 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm2965-201ENSMUST00000198365 343 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm18056-201ENSMUST00000207670 568 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm18061-201ENSMUST00000208350 562 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm18063-201ENSMUST00000208529 568 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm18052-201ENSMUST00000208750 559 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm18212-201ENSMUST00000211678 889 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 AC112945.1-201ENSMUST00000226413 514 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Chmp4cQ9D7F7 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm14058-201ENSMUST00000116082 735 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm12997-201ENSMUST00000120207 640 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm15329-201ENSMUST00000121408 155 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Gm43375-201ENSMUST00000196705 2480 ntBASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Chmp4cQ9D7F7 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms