Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Trim13Q9CYB0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.41□□□□□ -0.74
Trim13Q9CYB0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm23270-201ENSMUST00000104055 131 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm14071-201ENSMUST00000117817 509 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm14723-201ENSMUST00000118686 215 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm22993-201ENSMUST00000175423 254 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm6621-201ENSMUST00000193251 772 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm3961-201ENSMUST00000204425 994 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm45865-201ENSMUST00000211815 945 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Trim13Q9CYB0 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim13Q9CYB0 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.4□□□□□ -0.75
Trim13Q9CYB0 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Trim13Q9CYB0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.4□□□□□ -0.75
Trim13Q9CYB0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Trim13Q9CYB0 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.75
Trim13Q9CYB0 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm11930-201ENSMUST00000117788 190 ntBASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm11222-201ENSMUST00000119005 738 ntBASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.39□□□□□ -0.75
Trim13Q9CYB0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC10.39□□□□□ -0.75
Trim13Q9CYB0 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms