Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm11427-201ENSMUST00000117952 1696 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm10461-201ENSMUST00000202073 4786 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm12420-201ENSMUST00000119869 1048 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Gm26021-201ENSMUST00000158664 131 ntBASIC11.07□□□□□ -0.64
Cdh23Q99PF4 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh23Q99PF4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm12481-201ENSMUST00000102482 297 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Ppih-205ENSMUST00000106321 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm44008-201ENSMUST00000204345 412 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Btrc-209ENSMUST00000224478 2194 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm7812-201ENSMUST00000203479 874 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Olfr139-203ENSMUST00000206280 1059 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm19090-201ENSMUST00000218187 774 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm24146-201ENSMUST00000082760 321 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Gm21142-201ENSMUST00000179999 2604 ntBASIC11.06□□□□□ -0.64
Cdh23Q99PF4 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm12950-201ENSMUST00000121683 417 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm5501-201ENSMUST00000165917 832 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Mir6981-201ENSMUST00000184293 115 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm38301-201ENSMUST00000195573 543 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm8162-201ENSMUST00000213951 665 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm8864-201ENSMUST00000118653 1010 ntBASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh23Q99PF4 Gm3116-201ENSMUST00000189440 1116 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms