Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm8436-201ENSMUST00000210152 1080 ntBASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm5749-201ENSMUST00000210673 1090 ntBASIC9.9□□□□□ -0.82
Scrt1Q99M85 Olfr692-202ENSMUST00000217827 1126 ntBASIC9.9□□□□□ -0.82
Scrt1Q99M85 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.9□□□□□ -0.82
Scrt1Q99M85 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Scrt1Q99M85 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.9□□□□□ -0.83
Scrt1Q99M85 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Scrt1Q99M85 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 AC158636.1-201ENSMUST00000220118 1393 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm6630-201ENSMUST00000119199 454 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm5555-201ENSMUST00000120352 1111 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm12791-201ENSMUST00000120788 655 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm15620-201ENSMUST00000122949 270 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm22846-201ENSMUST00000157706 270 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm9081-201ENSMUST00000182346 991 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm28937-201ENSMUST00000185413 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm29400-201ENSMUST00000187208 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm28662-201ENSMUST00000188446 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm28251-201ENSMUST00000188835 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm37318-201ENSMUST00000194325 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm38017-201ENSMUST00000194768 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm37287-201ENSMUST00000195449 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm37793-201ENSMUST00000195548 695 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.89□□□□□ -0.83
Scrt1Q99M85 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Scrt1Q99M85 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms