Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdhga4Q91XY4 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm7741-201ENSMUST00000181445 989 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm43186-201ENSMUST00000198130 824 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm45770-201ENSMUST00000212105 616 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdhga4Q91XY4 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm12029-201ENSMUST00000120073 832 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm8459-201ENSMUST00000162504 760 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm24514-201ENSMUST00000174961 285 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm3551-201ENSMUST00000190750 664 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm38314-201ENSMUST00000195709 625 ntBASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdhga4Q91XY4 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms