Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Treml1Q8K558 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.05□□□□□ -0.64
Treml1Q8K558 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.05□□□□□ -0.64
Treml1Q8K558 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Treml1Q8K558 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.05□□□□□ -0.64
Treml1Q8K558 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Treml1Q8K558 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm18561-201ENSMUST00000206027 804 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm2875-201ENSMUST00000211333 360 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.04□□□□□ -0.64
Treml1Q8K558 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Treml1Q8K558 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Treml1Q8K558 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Treml1Q8K558 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm13937-201ENSMUST00000121000 988 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm43163-201ENSMUST00000196571 442 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Mt1-202ENSMUST00000211807 1085 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.03□□□□□ -0.64
Treml1Q8K558 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm10263-201ENSMUST00000085163 300 ntBASIC11.03□□□□□ -0.64
Treml1Q8K558 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.03□□□□□ -0.64
Treml1Q8K558 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Treml1Q8K558 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms