Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm25514-201ENSMUST00000083860 135 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC14.7□□□□□ -0.06
Ddx54Q8K4L0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm8707-201ENSMUST00000183325 980 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm40332-201ENSMUST00000199847 938 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm18041-201ENSMUST00000218210 618 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 AC133517.1-201ENSMUST00000225825 594 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ddx54Q8K4L0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gm23062-201ENSMUST00000102349 110 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gm11919-201ENSMUST00000117609 721 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gm15373-201ENSMUST00000121495 214 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Mir8111-201ENSMUST00000184463 137 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ddx54Q8K4L0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ddx54Q8K4L0 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 178.9 ms