Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc28bQ8CEG5 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm14726-201ENSMUST00000120623 896 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Mir1982-201ENSMUST00000157368 74 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm8343-201ENSMUST00000182705 994 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm31256-201ENSMUST00000194705 506 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Olfr284-202ENSMUST00000206647 966 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm7357-201ENSMUST00000195361 2991 ntBASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm21874-202ENSMUST00000190315 1538 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc28bQ8CEG5 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccdc28bQ8CEG5 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccdc28bQ8CEG5 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Ccdc28bQ8CEG5 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Dhx34-207ENSMUST00000163968 3801 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm4857-201ENSMUST00000192718 785 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Rprl1-202ENSMUST00000198476 238 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm45880-201ENSMUST00000213041 853 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Gm9797-202ENSMUST00000218003 294 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ccdc28bQ8CEG5 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms