Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm14193-201ENSMUST00000105067 153 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc38Q8CDN8 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm4294-201ENSMUST00000105169 614 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm24990-201ENSMUST00000157406 323 ntBASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc38Q8CDN8 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc38Q8CDN8 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm7857-201ENSMUST00000117957 358 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc38Q8CDN8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms