Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm43522-201ENSMUST00000196697 1922 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm8684-201ENSMUST00000195078 1564 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Paupar-201ENSMUST00000194826 3482 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm12420-201ENSMUST00000119869 1048 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm25426-201ENSMUST00000157606 170 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm9515-201ENSMUST00000200276 647 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm8557-201ENSMUST00000220777 475 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Gm42815-201ENSMUST00000198787 1470 ntBASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.11■□□□□ 0.33
Pabpn1Q8CCS6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm12950-201ENSMUST00000121683 417 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm6467-201ENSMUST00000171547 609 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm6463-201ENSMUST00000182090 966 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm44936-201ENSMUST00000207324 735 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm8162-201ENSMUST00000213951 665 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 AC154575.1-201ENSMUST00000227166 1474 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Gm19001-201ENSMUST00000222736 1651 ntBASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pabpn1Q8CCS6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm16329-201ENSMUST00000148174 371 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm17250-201ENSMUST00000180494 1010 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Ighv5-10-201ENSMUST00000194591 252 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm7664-201ENSMUST00000221988 745 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Arl15-202ENSMUST00000224068 1002 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 AC116390.1-201ENSMUST00000227975 670 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm37437-201ENSMUST00000194451 1937 ntBASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pabpn1Q8CCS6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Gm17980-201ENSMUST00000217977 2349 ntBASIC17.08■□□□□ 0.33
Pabpn1Q8CCS6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms