Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm45865-201ENSMUST00000211815 945 ntBASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC10.04□□□□□ -0.8
Lysmd4Q8CC84 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm12857-201ENSMUST00000117678 592 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm25226-201ENSMUST00000158198 123 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm8815-201ENSMUST00000173809 620 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 AA914427-201ENSMUST00000193194 1166 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Lysmd4Q8CC84 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.02□□□□□ -0.8
Lysmd4Q8CC84 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Gm11663-201ENSMUST00000117888 290 ntBASIC10.02□□□□□ -0.81
Lysmd4Q8CC84 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms