Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Saa-ps-201ENSMUST00000211148 320 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 AC122024.3-201ENSMUST00000217719 294 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.37□□□□□ -0.43
Trim9Q8C7M3 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim9Q8C7M3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC12.36□□□□□ -0.43
Trim9Q8C7M3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.36□□□□□ -0.43
Trim9Q8C7M3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trim9Q8C7M3 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm44323-201ENSMUST00000198689 129 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trim9Q8C7M3 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim9Q8C7M3 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms