Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm14263-201ENSMUST00000117955 746 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm12663-201ENSMUST00000118481 958 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm12136-201ENSMUST00000120460 1209 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm15197-201ENSMUST00000120526 478 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm12899-201ENSMUST00000120565 551 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Platr10-202ENSMUST00000191479 818 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm9369-201ENSMUST00000196009 733 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm43380-201ENSMUST00000200421 220 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm25580-201ENSMUST00000083409 327 ntBASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp44Q8C2S0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm11451-201ENSMUST00000118946 630 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm11667-201ENSMUST00000119828 486 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp44Q8C2S0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp44Q8C2S0 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Usp44Q8C2S0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.08□□□□□ -0.31
Usp44Q8C2S0 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.08□□□□□ -0.31
Usp44Q8C2S0 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp44Q8C2S0 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp44Q8C2S0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp44Q8C2S0 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 BC043934-202ENSMUST00000185694 2356 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.08□□□□□ -0.32
Usp44Q8C2S0 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp44Q8C2S0 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 154.3 ms