Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 CT009713.10-202ENSMUST00000225734 696 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Erich3-203ENSMUST00000189969 3460 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Tsen54Q8C2A2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm12463-201ENSMUST00000118271 849 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm8885-201ENSMUST00000189382 598 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm9257-201ENSMUST00000221254 232 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.41□□□□□ -0.9
Tsen54Q8C2A2 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Tsen54Q8C2A2 Mir877-201ENSMUST00000104738 85 ntBASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms