Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ccdc116Q80X53 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm12419-201ENSMUST00000116649 636 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm15236-201ENSMUST00000117309 379 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm12218-201ENSMUST00000117666 399 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm28941-201ENSMUST00000185536 1017 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm9723-201ENSMUST00000192100 457 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm18515-201ENSMUST00000219755 797 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Ccdc116Q80X53 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ccdc116Q80X53 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms