Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Scaf4Q6PFF0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm15276-201ENSMUST00000145953 498 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm20614-201ENSMUST00000177106 632 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm37666-201ENSMUST00000194110 866 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm38321-201ENSMUST00000195053 235 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm45575-201ENSMUST00000210283 548 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm13097-201ENSMUST00000210722 397 ntBASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Scaf4Q6PFF0 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm23596-201ENSMUST00000104304 132 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm13392-201ENSMUST00000117708 150 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm8566-201ENSMUST00000120174 465 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm43433-201ENSMUST00000196573 481 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm8913-201ENSMUST00000209491 641 ntBASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Scaf4Q6PFF0 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms