Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm9211-201ENSMUST00000182882 975 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm37826-201ENSMUST00000195329 322 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.56□□□□□ -0.4
Usp49Q6P9L4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm37284-201ENSMUST00000193607 539 ntBASIC12.55□□□□□ -0.4
Usp49Q6P9L4 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Usp49Q6P9L4 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Usp49Q6P9L4 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 124.8 ms