Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Krt39Q6IFX4 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm13916-201ENSMUST00000117368 628 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm15374-201ENSMUST00000119313 844 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm8100-201ENSMUST00000182906 988 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Mir6927-201ENSMUST00000184494 71 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Krt39Q6IFX4 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Krt39Q6IFX4 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Krt39Q6IFX4 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Krt39Q6IFX4 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Krt39Q6IFX4 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Krt39Q6IFX4 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm12247-201ENSMUST00000117585 670 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm12217-201ENSMUST00000118858 696 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm15329-201ENSMUST00000121408 155 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm17040-202ENSMUST00000170597 889 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm7504-201ENSMUST00000201449 424 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm17825-201ENSMUST00000206836 794 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Gm10288-201ENSMUST00000084614 537 ntBASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Krt39Q6IFX4 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Krt39Q6IFX4 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms