Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
VcanQ62059 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Gm44167-201ENSMUST00000204957 1878 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VcanQ62059 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.23□□□□□ -0.77
VcanQ62059 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 AC163351.1-201ENSMUST00000225539 737 ntBASIC10.23□□□□□ -0.77
VcanQ62059 Tssk4-204ENSMUST00000226591 1243 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
VcanQ62059 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC10.23□□□□□ -0.77
VcanQ62059 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VcanQ62059 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
VcanQ62059 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm9864-201ENSMUST00000090043 1656 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 Ucma-202ENSMUST00000115010 847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm42402-201ENSMUST00000208341 1054 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
VcanQ62059 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 AA474408-201ENSMUST00000098110 3339 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
VcanQ62059 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 Gm26021-201ENSMUST00000158664 131 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm17107-201ENSMUST00000170983 553 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm27953-201ENSMUST00000185171 143 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 AC147366.2-201ENSMUST00000226859 2038 ntBASIC10.22□□□□□ -0.77
VcanQ62059 AC153566.1-201ENSMUST00000216441 2057 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.22□□□□□ -0.77
VcanQ62059 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
VcanQ62059 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm15369-201ENSMUST00000119681 394 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm12133-201ENSMUST00000121775 661 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm25145-201ENSMUST00000177640 110 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Gm4891-201ENSMUST00000182279 912 ntBASIC10.22□□□□□ -0.77
VcanQ62059 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 Gm6677-201ENSMUST00000195100 441 ntBASIC10.22□□□□□ -0.77
VcanQ62059 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC10.22□□□□□ -0.77
VcanQ62059 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
VcanQ62059 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Gm11960-201ENSMUST00000122068 925 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC10.21□□□□□ -0.77
VcanQ62059 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Gm29485-201ENSMUST00000190220 282 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Gm38220-201ENSMUST00000195774 1447 ntBASIC10.21□□□□□ -0.77
VcanQ62059 Ift172-206ENSMUST00000201809 405 ntTSL 5 BASIC10.21□□□□□ -0.77
VcanQ62059 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
VcanQ62059 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC10.21□□□□□ -0.78
VcanQ62059 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.21□□□□□ -0.78
VcanQ62059 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
VcanQ62059 Gm6721-201ENSMUST00000218353 1445 ntBASIC10.21□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 475.5 ms