Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm6880-201ENSMUST00000114125 627 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm10522-201ENSMUST00000194503 1163 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 0610005C13Rik-211ENSMUST00000211530 402 ntTSL 3 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 AC090654.1-201ENSMUST00000225584 1071 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Mup-ps29-201ENSMUST00000122281 202 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm15895-201ENSMUST00000157018 731 ntTSL 3 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm5857-201ENSMUST00000198953 493 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm44008-201ENSMUST00000204345 412 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 AC154548.2-201ENSMUST00000224621 469 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Grk6-205ENSMUST00000224653 2976 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Ces2a-204ENSMUST00000164182 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Erich3-203ENSMUST00000189969 3460 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm45719-201ENSMUST00000207954 1662 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm22649-201ENSMUST00000175134 298 ntBASIC5.71□□□□□ -1.5
Ush2AQ2QI47 1700052H01Rik-201ENSMUST00000196142 717 ntTSL 3 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ush2AQ2QI47 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm16277-201ENSMUST00000143595 662 ntTSL 3 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm17084-201ENSMUST00000163843 511 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm21976-202ENSMUST00000180066 831 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm27500-201ENSMUST00000184331 336 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm32842-201ENSMUST00000212653 738 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Defa22-201ENSMUST00000098897 419 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm43570-201ENSMUST00000199951 3688 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm8603-201ENSMUST00000115649 1515 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm24470-201ENSMUST00000104486 132 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm12445-201ENSMUST00000117947 885 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm24368-201ENSMUST00000175388 106 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm28115-201ENSMUST00000188985 360 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm6123-201ENSMUST00000193658 1069 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 9230112J17Rik-202ENSMUST00000217430 764 ntTSL 3 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Snx6-204ENSMUST00000218934 1441 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm9924-202ENSMUST00000192760 2311 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Gm20501-202ENSMUST00000211303 2194 ntBASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ush2AQ2QI47 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms