Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col9a2Q07643 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm11952-201ENSMUST00000121172 821 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm14165-201ENSMUST00000121456 952 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Mir8091-201ENSMUST00000183602 139 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm5298-201ENSMUST00000201122 892 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm42867-201ENSMUST00000202995 469 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 CT025618.1-203ENSMUST00000227008 589 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.15□□□□□ -0.46
Col9a2Q07643 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col9a2Q07643 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Col9a2Q07643 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm44106-201ENSMUST00000203153 1599 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm15003-201ENSMUST00000118884 446 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm11354-201ENSMUST00000121974 422 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Col9a2Q07643 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm25201-201ENSMUST00000083093 170 ntBASIC12.14□□□□□ -0.47
Col9a2Q07643 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Col9a2Q07643 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col9a2Q07643 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.13□□□□□ -0.47
Col9a2Q07643 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Col9a2Q07643 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Col9a2Q07643 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms