Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1sQ02789 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1sQ02789 AC154640.1-203ENSMUST00000228316 1618 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm11929-201ENSMUST00000118175 945 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm12961-201ENSMUST00000120507 1050 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Mir6981-201ENSMUST00000184293 115 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Rwdd2a-203ENSMUST00000185566 1054 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm45225-201ENSMUST00000206852 1139 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm45847-201ENSMUST00000209402 1880 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1sQ02789 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC13.91□□□□□ -0.18
Cacna1sQ02789 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm13169-201ENSMUST00000122090 1459 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm24981-201ENSMUST00000104459 132 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm8482-201ENSMUST00000117972 471 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm13841-201ENSMUST00000118829 483 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm11449-201ENSMUST00000119175 476 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm6881-201ENSMUST00000121811 833 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm8210-201ENSMUST00000178557 483 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm15454-201ENSMUST00000179718 483 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ly6c1-206ENSMUST00000188845 784 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm18182-201ENSMUST00000191380 1251 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm30652-201ENSMUST00000199103 430 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm42710-201ENSMUST00000200608 985 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm28653-202ENSMUST00000227082 521 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 AC123698.1-201ENSMUST00000227090 402 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm6344-201ENSMUST00000075962 483 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Gm5697-201ENSMUST00000122295 2482 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.9□□□□□ -0.18
Cacna1sQ02789 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1sQ02789 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cacna1sQ02789 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Gm22661-201ENSMUST00000104192 132 ntBASIC13.89□□□□□ -0.19
Cacna1sQ02789 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC13.89□□□□□ -0.19
Cacna1sQ02789 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cacna1sQ02789 3830406C13Rik-205ENSMUST00000223702 900 ntBASIC13.89□□□□□ -0.19
Cacna1sQ02789 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Cacna1sQ02789 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms