Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Npas1P97459 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Npas1P97459 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Npas1P97459 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.41□□□□□ -0.9
Npas1P97459 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Npas1P97459 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Mospd4-201ENSMUST00000180618 576 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Uba52-ps-201ENSMUST00000183770 379 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Gm8712-201ENSMUST00000221090 701 ntBASIC9.41□□□□□ -0.9
Npas1P97459 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Mre11a-201ENSMUST00000034405 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.41□□□□□ -0.9
Npas1P97459 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Npas1P97459 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Npas1P97459 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Npas1P97459 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Npas1P97459 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Npas1P97459 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Npas1P97459 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Npas1P97459 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.4□□□□□ -0.9
Npas1P97459 AC126444.1-201ENSMUST00000225938 1768 ntBASIC9.4□□□□□ -0.9
Npas1P97459 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Npas1P97459 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Npas1P97459 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Npas1P97459 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Lhx9-201ENSMUST00000019374 4937 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Npas1P97459 Gm5370-201ENSMUST00000187187 574 ntBASIC9.4□□□□□ -0.9
Npas1P97459 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Npas1P97459 Gm6439-201ENSMUST00000199849 862 ntBASIC9.4□□□□□ -0.9
Npas1P97459 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.4□□□□□ -0.9
Npas1P97459 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.4□□□□□ -0.9
Npas1P97459 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Npas1P97459 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms