Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lig3P97386 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lig3P97386 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.37□□□□□ -0.43
Lig3P97386 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lig3P97386 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lig3P97386 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lig3P97386 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.36□□□□□ -0.43
Lig3P97386 Gm12218-201ENSMUST00000117666 399 ntBASIC12.36□□□□□ -0.43
Lig3P97386 Gm12579-201ENSMUST00000118040 783 ntBASIC12.36□□□□□ -0.43
Lig3P97386 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Lig3P97386 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Gm43610-201ENSMUST00000199117 365 ntBASIC12.36□□□□□ -0.43
Lig3P97386 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.36□□□□□ -0.43
Lig3P97386 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Lig3P97386 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.36□□□□□ -0.43
Lig3P97386 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Gm23680-201ENSMUST00000083162 164 ntBASIC12.36□□□□□ -0.43
Lig3P97386 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lig3P97386 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.36□□□□□ -0.43
Lig3P97386 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lig3P97386 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lig3P97386 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lig3P97386 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Lig3P97386 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Lig3P97386 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Lig3P97386 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.35□□□□□ -0.43
Lig3P97386 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.35□□□□□ -0.43
Lig3P97386 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.35□□□□□ -0.43
Lig3P97386 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.35□□□□□ -0.43
Lig3P97386 Gm45500-201ENSMUST00000211676 803 ntBASIC12.35□□□□□ -0.43
Lig3P97386 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.35□□□□□ -0.43
Lig3P97386 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.35□□□□□ -0.43
Lig3P97386 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.35□□□□□ -0.43
Lig3P97386 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm5805-201ENSMUST00000072779 456 ntBASIC12.35□□□□□ -0.43
Lig3P97386 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lig3P97386 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.35□□□□□ -0.43
Lig3P97386 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.35□□□□□ -0.43
Lig3P97386 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lig3P97386 Gm45828-201ENSMUST00000206938 1836 ntBASIC12.34□□□□□ -0.43
Lig3P97386 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lig3P97386 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.34□□□□□ -0.43
Lig3P97386 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lig3P97386 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.34□□□□□ -0.43
Lig3P97386 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lig3P97386 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lig3P97386 Gm16166-201ENSMUST00000118291 787 ntBASIC12.34□□□□□ -0.43
Lig3P97386 Gm14942-201ENSMUST00000119642 336 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms