Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC9.42□□□□□ -0.9
SgcaP82350 Mir1247-201ENSMUST00000116706 82 ntBASIC9.42□□□□□ -0.9
SgcaP82350 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.42□□□□□ -0.9
SgcaP82350 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.42□□□□□ -0.9
SgcaP82350 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Gm6266-201ENSMUST00000203844 806 ntBASIC9.42□□□□□ -0.9
SgcaP82350 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.42□□□□□ -0.9
SgcaP82350 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
SgcaP82350 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.42□□□□□ -0.9
SgcaP82350 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.42□□□□□ -0.9
SgcaP82350 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.42□□□□□ -0.9
SgcaP82350 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
SgcaP82350 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gm43274-201ENSMUST00000202545 5000 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SgcaP82350 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SgcaP82350 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SgcaP82350 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.41□□□□□ -0.9
SgcaP82350 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.41□□□□□ -0.9
SgcaP82350 Gm3329-201ENSMUST00000159873 556 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.41□□□□□ -0.9
SgcaP82350 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gm43118-201ENSMUST00000199149 775 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.41□□□□□ -0.9
SgcaP82350 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
SgcaP82350 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.41□□□□□ -0.9
SgcaP82350 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.41□□□□□ -0.9
SgcaP82350 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Gm45289-201ENSMUST00000211048 2577 ntBASIC9.41□□□□□ -0.9
SgcaP82350 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
SgcaP82350 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
SgcaP82350 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
SgcaP82350 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms