Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm22937-201ENSMUST00000103954 131 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm11979-201ENSMUST00000119629 743 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm12712-201ENSMUST00000120676 801 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm11502-201ENSMUST00000120917 1211 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm12453-201ENSMUST00000121981 331 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13981-201ENSMUST00000122360 447 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm16167-201ENSMUST00000160428 1065 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm26119-201ENSMUST00000175601 104 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Lmo4P61969 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gm7880-201ENSMUST00000203748 871 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.06□□□□□ -0.96
Lmo4P61969 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC9.06□□□□□ -0.96
Lmo4P61969 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC9.06□□□□□ -0.96
Lmo4P61969 AC126799.1-201ENSMUST00000221976 246 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Adgrv1-214ENSMUST00000224088 1492 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.06□□□□□ -0.96
Lmo4P61969 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Lmo4P61969 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.06□□□□□ -0.96
Lmo4P61969 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Lmo4P61969 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm11380-201ENSMUST00000118067 560 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm12463-201ENSMUST00000118271 849 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm20414-201ENSMUST00000172918 646 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm20392-201ENSMUST00000173047 701 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm5870-201ENSMUST00000196461 282 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm43778-201ENSMUST00000199438 199 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm43969-201ENSMUST00000204833 535 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.05□□□□□ -0.96
Lmo4P61969 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.05□□□□□ -0.96
Lmo4P61969 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Lmo4P61969 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms