Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm23596-201ENSMUST00000104304 132 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm11509-201ENSMUST00000117358 325 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm11700-201ENSMUST00000119409 403 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm14441-201ENSMUST00000121960 540 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm23699-201ENSMUST00000158835 135 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm5732-201ENSMUST00000182596 1007 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Mir7677-201ENSMUST00000184226 67 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Sec61a1P61620 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm9555-201ENSMUST00000200908 583 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm270-201ENSMUST00000223010 976 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Gm10254-201ENSMUST00000052888 867 ntBASIC9.92□□□□□ -0.82
Sec61a1P61620 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a1P61620 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a1P61620 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Sec61a1P61620 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm14058-201ENSMUST00000116082 735 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm5419-201ENSMUST00000119301 527 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm11450-201ENSMUST00000121144 333 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a1P61620 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm43184-201ENSMUST00000197247 542 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.91□□□□□ -0.82
Sec61a1P61620 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Gm26448-201ENSMUST00000082446 203 ntBASIC9.91□□□□□ -0.82
Sec61a1P61620 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a1P61620 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms