Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup43P59235 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm44153-201ENSMUST00000204162 1580 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Snord17-201ENSMUST00000104526 238 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.62□□□□□ -0.71
Nup43P59235 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC10.62□□□□□ -0.71
Nup43P59235 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm13366-201ENSMUST00000122198 970 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm22334-201ENSMUST00000158070 133 ntBASIC10.62□□□□□ -0.71
Nup43P59235 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup43P59235 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm43520-201ENSMUST00000197996 164 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm45550-201ENSMUST00000209380 946 ntBASIC10.62□□□□□ -0.71
Nup43P59235 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup43P59235 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Nup43P59235 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC10.62□□□□□ -0.71
Nup43P59235 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Nup43P59235 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Nup43P59235 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.62□□□□□ -0.71
Nup43P59235 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Nup43P59235 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.61□□□□□ -0.71
Nup43P59235 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.61□□□□□ -0.71
Nup43P59235 Gm19246-201ENSMUST00000173599 255 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Gm3786-201ENSMUST00000202659 378 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.61□□□□□ -0.71
Nup43P59235 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.61□□□□□ -0.71
Nup43P59235 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.61□□□□□ -0.71
Nup43P59235 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nup43P59235 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms