Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Cdkn2bP55271 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm12218-201ENSMUST00000117666 399 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm14127-201ENSMUST00000117906 678 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm23085-201ENSMUST00000157849 293 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm12407-201ENSMUST00000180219 324 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.72□□□□□ -0.69
Cdkn2bP55271 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Cdkn2bP55271 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm14592-201ENSMUST00000117201 560 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm15198-201ENSMUST00000117283 177 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm4482-201ENSMUST00000200876 742 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 AC154319.1-201ENSMUST00000216330 312 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.71□□□□□ -0.69
Cdkn2bP55271 AL589735.1-201ENSMUST00000224353 270 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cdkn2bP55271 Gm21811-201ENSMUST00000096485 930 ntBASIC10.71□□□□□ -0.69
Cdkn2bP55271 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms